Atlases of animal models of colitis:

- Adoptive Transfer Model Atlas
- Histology Scoring Sheet
- Others under construction (DNBS, Samp/yit1, ....)

Powerpoint on preparing tissue for histology:

- Powerpoint Presentation

Histology Software:

- Hamamatsu/NDP (matches format for scanned files from microscopy core, good for photos of images
- Aperio (can be used with NDP files, good for photos of images)
- QuPath (most powerful, accepts all files, has a steeper learning curve)
Zeiss (link to download Zen Blue Free Microscope Software, ZEN lite from Carl Zeiss Microscopy USA)