Principal Statistician
Division of Biomedical Informatics
Research Interest
The overarching goal of my research is to discover clinically-actionable knowledge from (massive) data-sets.
- Data Mining
- Predictive Modeling
- Bioinformatics
- Statistical Learning
Selected Publication
Scholar Google
- Jiang X, Osl M, Kim J, Ohno-Machado L (2012) Calibrating predictive model estimates to support personalized medicine, J Am Med Inform Assoc. 2012 Mar 1;19(2):263-74
- Kim HE, Jiang X, Kim J, Ohno-Machado L (2011) Trends in biomedical informatics: most cited topics from recent years,
Journal of the American Medical Informatics Association 18 (Suppl 1), i166-i170
- Ohno-Machado L, Bafna V, AA Boxwala AA, Chapman BE, Chapman WW, Chaudhuri K, and iDASH Team,
iDASH: integrating data for analysis, anonymization, and sharing
Journal of the American Medical Informatics Association
- Kamberov YG, Kim J, Mazitschek R, Wuo WO, Whitman MR (2011) Microarray profiling reveals the Integrated Stress Response is activated by Halofuginone in mammary epithelial cells, (under review)
- Kim J, Grillo JM, Boxwala AA, Jiang XJ, Mandelbaum RB, Patel BA, Mikels D, Vinterbo SA, Ohno-Machado L (2011), Anomaly and Signature Filtering Improve Classifier Performance For Detection Of Suspicious Access To EHRs, American Medical Informatics Association Annual Symposium
- Boxwala A, Kim J, Grillo JM, Ohno-Machado L (2011) Using statistical and machine learning to help institutions detect suspicious access to electronic health records, JAMIA, 18:498-505
- Kim J, Patel K, Jung H, Kuo WP, Ohno-Machado L (2011) AnyExpress: integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm,BMC Bioinformatics, March 17:12-75
- Jiang X, Osl M, Kim J, Ohno-Machado L (2011) Smooth Isotonic Regression: A New Method to Calibrate Predictive Models,American Medical Informatics Association Annual Symposium
- Eckert MA, Lwin TM, Chang AT, Kim J, Danis E, Ohno-Machado L, Yang J (2011) Twist1-induced invadopodia formation promotes tumor metastasis,Cancer Cell, 19(3):372-386.
- Casas E, Kim J, Bendesky A, Ohno-Machado L, Wolfe CJ, Yang J (2011) Snail2 is an essential mediator of Twist1-induced epithelial mesenchymal transition and metastasis,Cancer Res, 71(1):245-254
Education
- MS in Statistics, University of Wisconsin, Madison, WI, USA
- BS in Statistics and MS in Medicine (Bioinformatics), Seoul National University, South Korea
Contact
Email: j5kim@ucsd.edu