Publications for reporting period 2-1-2012 to 4-01-18
Public Access compliance, UCSD CTSA award cited
2018
Sun HY, Proudfoot JA, McCandless RT.
Prenatal detection of critical cardiac outflow tract anomalies remains suboptimal despite revised obstetrical imaging guidelines.
Congenit Heart Dis. 2018 Jul 18. [Epub ahead of print] PMID: 30022603
Mausbach BT, Bos T, Irwin SA. Mental health treatment dose and annual healthcare costs in patients with cancer and major depressive disorder. Health Psychol. 2018 Nov;37(11):1035-1040. PMID: 30265046 [PubMed - in process] PMCID: PMC6188821 [Available on 2019-11-01]
Bertrand KA, Hanan NJ, Honerkamp-Smith G, Best BM, Chambers CD. Marijuana Use by Breastfeeding Mothers and Cannabinoid Concentrations in Breast Milk. Pediatrics. 2018 Sep;142(3). pii: e20181076. PMID: 30150212 [PubMed - in process]
Schork NJ. Randomized clinical trials and personalized medicine: A commentary on deaton and cartwright. Soc Sci Med. 2018 Aug;210:71-73. PMID: 29786513 [PubMed - in process]
Ding KF, Finlay D, Yin H, Hendricks WPD, Sereduk C, Kiefer J, Sekulic A, LoRusso PM, Vuori K, Trent JM, Schork NJ. Network Rewiring in Cancer: Applications to Melanoma Cell Lines and the Cancer Genome Atlas Patients. Front Genet. 2018 Jul 10;9:228. PMID: 30042785 [PubMed] PMCID: PMC6048451
Goetz LH, Schork NJ. Personalized medicine: motivation, challenges, and progress. Fertil Steril. 2018 Jun;109(6):952-963. PMID: 29935653 [PubMed - in process]
Limjoco J, Thornburg CD.
Risk factors for cardiovascular disease in children and young adults with haemophilia.
Haemophilia. 2018 Jul 13. [Epub ahead of print] PMID: 30004151 [PubMed - as supplied by publisher]
Schwimmer MH, Sawh MC, Heskett KM, Goyal NP, Newton KP, Schwimmer JB.
A Bibliometric Analysis of Clinical and Translational Research in Pediatric Gastroenterology from 1970 to 2017.
J Pediatr Gastroenterol Nutr. 2018 Jun 12. [Epub ahead of print] PMID: 29901549 [PubMed - as supplied by publisher]
Lombardo MV, Moon HM, Su J, Palmer TD, Courchesne E, Pramparo T .Maternal immune activation dysregulation of the fetal brain transcriptome and relevance to the pathophysiology of autism spectrum disorder.
Mol Psychiatry. 2018 Apr;23(4):1001-1013. [Epub ahead of print] PMID: 28322282 [PubMed - in process]
Harlow KE, Africa JA, Wells A, Belt PH, Behling CA, Jain AK, Molleston JP, Newton KP, Rosenthal P, Vos MB, Xanthakos SA, Lavine JE, Schwimmer JB; Nonalcoholic Steatohepatitis Clinical Research Network (NASH CRN).
Clinically Actionable Hypercholesterolemia and Hypertriglyceridemia in Children with Nonalcoholic Fatty Liver Disease.
J Pediatr. 2018 Apr 13. pii: S0022-3476(18)30281-6. [Epub ahead of print] PMID: 29661561 [PubMed - as supplied by publisher]
Hu H, Zhu X, Wang C, Zhang L, Li X, Lee S, Huang Z, Chen R, Chen Z, Wang C, Gu Y, Chen Y, Lei Y, Zhang T, Kim N, Guo Y, Teng Y, Zhou W, Li Y, Nomoto A, Sternini S, Zhou Q, Pharr M, di Scalea FL, Xu S.Stretchable ultrasonic transducer arrays for three-dimensional imaging on complex surfaces.
Sci Adv. 2018 Mar 23;4(3):eaar3979. eCollection 2018 Mar. PMID: 29740603. PMCID:
PMC5938227
Murzin VL, Woods K, Moiseenko V, Karunamuni R, Tringale KR, Seibert TM, Connor MJ, Simpson DR, Sheng K, Hattangadi-Gluth JA.4π plan optimization for cortical-sparing brain radiotherapy.
Radiother Oncol. 2018 Mar 5. [Epub ahead of print] PMID: 29519628 [PubMed - as supplied by publisher]
Unkart JT, Proudfoot J, Wallace AM. Outcomes of “one-day” vs “two-day” injection protocols using Tc-99m tilmanocept for sentinel lymph node biopsy in breast cancer.
Breast J. 2018 Mar 2. PMID: 29498443 [Epub ahead of print]
Proudfoot J, Faig W, Natarajan L, Xu R.A joint marginal-conditional model for multivariate longitudinal data.
Stat Med. 2018 Feb 28;37(5):813-828. Epub 2017 Dec 4. PMID: 29205414 [PubMed - in process]
Middleton MS, Van Natta ML, Heba ER, Alazraki A, Trout AT, Masand P, Brunt EM, Kleiner DE, Doo E, Tonascia J, Lavine JE, Shen W, Hamilton G, Schwimmer JB, Sirlin CB; NASH Clinical Research Network. Diagnostic accuracy of magnetic resonance imaging hepatic proton density fat fraction in pediatric nonalcoholic fatty liver disease. Hepatology. 2018 Mar;67(3):858-872. PMID: 29028128 [PubMed - indexed for MEDLINE] PMCID: PMC6211296 [Available on 2019-03-01]
Goyal NP, Schwimmer JB.The Genetics of Pediatric Nonalcoholic Fatty Liver Disease.
Clin Liver Dis. 2018 Feb;22(1):59-71. Epub 2017 Oct 5. PMID: 29128061 [PubMed - in process]
2017
Tichy ED, Sidibe DK, Tierney MT, Stec MJ, Sharifi-Sanjani M, Hosalkar H, Mubarak S, Johnson FB, Sacco A, Mourkioti F. Single Stem Cell Imaging and Analysis Reveals Telomere Length Differences in Diseased Human and Mouse Skeletal Muscles.
Stem Cell Reports. 2017 Aug 30. PMID: 28890163 [PubMed - as supplied by publisher]
Schork NJ, Goetz LH.Single-Subject Studies in Translational Nutrition Research.
Annu Rev Nutr. 2017 Aug 21. Epub 2017 Jul 17. PMID: 28715990 [PubMed - in process]
Schork NJ, Nazor K. Integrated Genomic Medicine: A Paradigm for Rare Diseases and Beyond. Adv Genet. 2017;97:81-113. PMID: 28838357 [PubMed - indexed for MEDLINE]
Wang K, Manning P, Szeverenyi N, Wolfson T, Hamilton G, Middleton MS, Vaida F, Yin M, Glaser K, Ehman RL, Sirlin CB. Repeatability and reproducibility of 2D and 3D hepatic MR elastography with rigid and flexible drivers at end-expiration and end-inspiration in healthy volunteers.Abdom Radiol (NY) 2017 Jun 13. doi: 10.1007/s00261-017-1206-4. [Epub ahead of print] PMID: 28612163.
Kalichman MW, Plemmons DK. Intervention to Promote Responsible Conduct of Research Mentoring.Sci Eng Ethics. 2017 Jun 12. doi: 10.1007/s11948-017-9929-8. [Epub ahead of print]. PMID: 28608033.
Connor MJ, Tringale K, Moiseenko V, Marshall DC, Moore K, Cervino L, Atwood T, Brown D, Mundt AJ, Pawlicki T, Recht A, Hattangadi-Gluth JA. Medical Device Recalls in Radiation Oncology: Analysis of US Food and Drug Administration Data, 2002-2015. 2017 Jun 1;98(2):438-446.
Int J Radiat Oncol Biol Phys. Epub 2017 Feb 12. PMID: 28463163
Karunamuni RA, White NS, McDonald CR, Connor M, Pettersson N, Seibert TM, Kuperman J, Farid N, Moiseenko V, Dale AM, Hattangadi-Gluth JA.Multi-component diffusion characterization of radiation-induced white matter damage. 2017 May;44(5):1747-1754.
Med Phys. Epub 2017 Mar 28. PMID: 28222217
Connor M, Karunamuni R, McDonald C, Seibert T, White N, Moiseenko V, Bartsch H, Farid N, Kuperman J, Krishnan A, Dale A, Hattangadi-Gluth JA. Regional susceptibility to dose-dependent white matter damage after brain radiotherapy. 2017 Apr 28. pii: S0167-8140(17)30146-9.
Radiother Oncol. [Epub ahead of print] PMID: 28460824
Khatibi B, Said ET, Sztain JF, Monahan AM, Gabriel RA, Furnish TJ, Tran JT, Donohue MC, Ilfeld BM. Continuous Transversus Abdominis Plane Nerve Blocks: Does Varying Local Anesthetic Delivery Method-Automatic Repeated Bolus Versus Continuous Basal Infusion-Influence the Extent of Sensation to Cold?: A Randomized, Triple-Masked, Crossover Study in Volunteers. Anesth Analg. 2017 Apr;124(4):1298-1303. doi: 10.1213/ANE.0000000000001939. PMID: 28319550.
Reas ET, Laughlin GA, Bergstrom J, Kritz-Silverstein D, Barrett-Connor E, McEvoy LK.Effects of Sex and Education on Cognitive Change Over a 27-Year Period in Older Adults: The Rancho Bernardo Study. 2017 Mar 16. pii: S1064-7481(17)30257-9.
Am J Geriatr Psychiatry. PMID: 28433548 [Epub ahead of print]
Lombardo MV, Moon HM, Su J, Palmer TD, Courchesne E, Pramparo T.Maternal immune activation dysregulation of the fetal brain transcriptome and relevance to the pathophysiology of autism spectrum disorder.Mol Psychiatry. 2017 Mar 21. doi: 10.1038/mp.2017.15. [Epub ahead of print] PMID: 28322282
Africa JA, Behling CA, Brunt EM, Zhang N, Luo Y, Wells A, Hou J, Belt PH, Kohil R, Lavine JE, Molleston JP, Newton KP, Whitington PF, Schwimmer JB. In Children With Nonalcoholic Fatty Liver Disease, Zone 1 Steatosis Is Associated With Advanced Fibrosis.ClinGastroenterol Hepatol. 2018 March; 16(3):438-446/e1. PMID: 28286193 [PubMed - in process]
Karunamuni RA, Seibert TM, White NS, McEvoy L, Farid N, Brewer J, Dale AM, McDonald CR, Hattangadi-Gluth JA. Abnormalities in hippocampal volume of glioma patients prior to radiotherapy. 2017 Mar;56(3):427-430. Acta Oncol. Epub 2017 Feb 3. PMID: 28156177 PMCID: PMC5426357 [Available on 2018-03-01]
Dimitrov S, Hulteng E, Hong S. Inflammation and exercise: Inhibition of monocytic intracellular TNF production by acute exercise via β2-adrenergic activation. 2017 Mar;61:60-68.
Brain Behav Immun. Epub 2016 Dec 21. PMID: 28011264
Seibert TM, Karunamuni R, Kaifi S, Burkeen J, Connor M, Krishnan AP, White NS, Farid N, Bartsch H, Murzin V, Nguyen TT, Moiseenko V, Brewer JB, McDonald CR, Dale AM, Hattangadi-Gluth JA.Cerebral Cortex Regions Selectively Vulnerable to Radiation Dose-Dependent Atrophy. 2017 April;97(5):910-918.
Int J Radiat Oncol Biol Phys. Epub 2017 Jan 6. PMID: 28333012 [PubMed - in process]
Sitapati A, Kim H, Berkovich B, Marmor R, Singh S, El-Kareh R, Clay B, Ohno-Machado L. Integrated precision medicine: the role of electronic health records in delivering personalized treatment.Wiley Interdiscip Rev Syst Biol Med. 2017 Feb 16. [Epub ahead of print] PMID: 28207198 [PubMed - as supplied by publisher]
Ilfeld BM. Continuous Peripheral Nerve Blocks: An Update of the Published Evidence and Comparison With Novel, Alternative Analgesic Modalities.
Anesth Analg. 2017 Jan;124(1):308-335. PMID: 27749354 [PubMed - in process]
Connor MJ, Marshall DC, Moiseenko V, Moore K, Cervino L, Atwood T, Sanghvi P, Mundt AJ, Pawlicki T, Recht A, Hattangadi-Gluth JA.Adverse Events Involving Radiation Oncology Medical Devices: Comprehensive Analysis of US Food and Drug Administration Data, 1991 to 2015.
International journal of radiation oncology, biology, physics. 2017 January 1;97(1):18-26. PubMed PMID: 27979446; PubMed Central PMCID: PMC5193217.
Dimsdale JE.Research on Somatization and Somatic Symptom Disorders: Ars longa, vita brevis. Psychosom Med. 2017 Nov/Dec;79(9):971-973. PMID: 28976443 [PubMed - in process]
Block RC, Holub A, Abdolahi A, Tu XM, Mousa SA, Oda MN. Effects of aspirin in combination with EPA and DHA on HDL-C cholesterol and ApoA1 exchange in individuals with type 2 diabetes mellitus.
Prostaglandins Leukot Essent Fatty Acids. 2017 Nov;126:25-31. Epub 2017 Sep 9. PMID: 29031392 [PubMed - in process]
Jacobs DM, Ard MC, Salmon DP, Galasko DR, Bondi MW, Edland SD. Potential implications of practice effects in Alzheimer's disease prevention trials.
Alzheimers Dement (N Y). 2017 Sep 19;3(4):531-535. eCollection 2017 Nov. PMID: 29124111 [PubMed]
Middleton MS, Heba ER, Hooker CA, Bashir MR, Fowler KJ, Sandrasegaran K, Brunt EM, Kleiner DE, Doo E, Van Natta ML, Lavine JE, Neuschwander-Tetri BA, Sanyal A, Loomba R, Sirlin CB; NASH Clinical Research Network. Agreement Between Magnetic Resonance Imaging Proton Density Fat Fraction Measurements and Pathologist-Assigned Steatosis Grades of Liver Biopsies From Adults With Nonalcoholic Steatohepatitis.
Gastroenterology. 2017 Sep;153(3):753-761. Epub 2017 Jun 15. PMID: 28624576 [PubMed - indexed for MEDLINE]
Seibert TM, Dalia Y, Karunamuni R, Piccioni D, McDonald CR, Farid N, Hattangadi-Gluth JA.
Unilateral hippocampal wasting after combined-modality therapy for glioblastoma.
Acta Oncol. 2018 May;57(5):688-691. Epub 2017 Nov 10. No abstract available. PMID: 29125006 [PubMed - in process]
Marshall D, Tringale K, Connor M, Punglia R, Recht A, Hattangadi-Gluth J.Nature of Medical Malpractice Claims Against Radiation Oncologists.
Int J Radiat Oncol Biol Phys. 2017 May 1;98(1):21-30. Epub 2017 Jan 16. PMID: 28586962 [PubMed - indexed for MEDLINE]
Tran T, Bowman-Carpio L, Buscher N, Ford JJ, Jenkins E, Kalay HN, Nakazono T, Orescan H, Sak R, Shin I, Davidson P.
Collaboration in Action: Measuring and Improving Contracting Performance in the University of California Contracting Network.
Res Manag Rev. 2017;22(1). PMID: [PubMed] PMCID: PMC6029617
Ding KF, Petricoin EF, Finlay D, Yin H, Hendricks WPD, Sereduk C, Kiefer J, Sekulic A, LoRusso PM, Vuori K, Trent JM, Schork NJ. Nonlinear mixed effects dose response modeling in high throughput drug screens: application to melanoma cell line analysis. Oncotarget. 2017 Dec 15;9(4):5044-5057. PMID: 29435161 [PubMed] PMCID: PMC5797032
Jiang H, Sun A, Venkatesh AG, Hall DA. An Audio Jack-Based Electrochemical Impedance Spectroscopy Sensor for Point-of-Care Diagnostics.
IEEE Sens J. 2017 Feb 1;17(3):589-597. Epub 2016 Dec 1. PMID: 28943809 [PubMed - in process]
2016
Nam DH, Rodriguez C, Remacle AG, Strongin AY, Ge X.Active-site MMP-selective antibody inhibitors discovered from convex paratope synthetic libraries. Proceedings of the National Academy of Sciences of the United States of America. 2016 December 27;113(52):14970-14975.
PubMed PMID: 27965386; PubMed Central PMCID: PMC5206513.
Kaneda MM, Messer KS, Ralainirina N, Li H, Leem CJ, Gorjestani S, Woo G, Nguyen AV, Figueiredo CC, Foubert P, Schmid MC, Pink M, Winkler DG, Rausch M, Palombella VJ, Kutok J, McGovern K, Frazer KA, Wu X, Karin M, Sasik R, Cohen EE, Varner JA. PI3Kγ is a molecular switch that controls immune suppression.
Nature. 2016 Nov 17;539(7629):437-442. Epub 2016 Sep 19. PMID: 27642729 [PubMed - indexed for MEDLINE]
Kaneda MM, Cappello P, Nguyen AV, Ralainirina N, Hardamon CR, Foubert P, Schmid MC, Sun P, Mose E, Bouvet M, Lowy AM, Valasek MA, Sasik R, Novelli F, Hirsch E, Varner JA. Macrophage PI3Kγ Drives Pancreatic Ductal Adenocarcinoma Progression. Cancer discovery. 2016 August;6(8):870-85.
PubMed PMID: 27179037; PubMed Central PMCID: PMC5091937.
Connor M, Karunamuni R, McDonald C, White N, Pettersson N, Moiseenko V, Seibert T, Marshall D, Cervino L, Bartsch H, Kuperman J, Murzin V, Krishnan A, Farid N, Dale A, Hattangadi-Gluth J. Dose-dependent white matter damage after brain radiotherapy. Radiother Oncol. 2016 Nov;121(2):209-216. PubMed PMID: 27776747; PubMed Central PMCID: PMC5136508 [Available on 2017-11-01].
Sun AC, Yao C, Venkatesh AG, Hall DA.An Efficient Power Harvesting Mobile Phone-Based Electrochemical Biosensor for Point-of-Care Health Monitoring. Sens Actuators B Chem. 2016 Nov 1;235:126-135. Epub 2016 May 6. PMID: 27725788.
Newton KP, Hou J, Crimmins NA, Lavine JE, Barlow SE, Xanthakos SA, Africa J, Behling C, Donithan M, Clark JM, Schwimmer JB.Prevalence of Prediabetes and Type 2 Diabetes in Children With Nonalcoholic Fatty Liver Disease. 2016 Oct 3;170(10):e161971. JAMA Pediatr. Epub 2016 Oct 3. PMID: 27478956
Chen S, Miyazaki M, Fisch K, Chang AN, Murre C.Id3 Orchestrates Germinal Center B Cell Development..
Mol Cell Biol. 2016 Sep 26. PMCID PMC5038142
Fox RG, Lytle NK, Jaquish DV, Park FD, Ito T, Bajaj J, Koechlein CS, Zimdahl B, Yano M, Kopp JL, Kritzik M, Sicklick JK, Sander M, Grandgenett PM, Hollingsworth MA, Shibata S, Pizzo D, Valasek MA, Sasik R, Scadeng M, Okano H7, Kim Y, MacLeod AR, Lowy AM, Reya T. Image-based detection and targeting of therapy resistance in pancreatic adenocarcinoma.Nature. 2016 Jun 6. PMCID: PMC4998062
Huang JS, Terrones L, Simmons AN, Kaye W, Strigo I.A Pilot Study of fMRI Responses to Somatic Pain Stimuli in Youth with Functional and Inflammatory Gastrointestinal Disease.J Pediatr Gastroenterol Nutr. 2016 Nov;63(5):500-507. PubMed PMID: 27574880; PubMed Central PMCID: PMC5074879 [Available on 2017-11-01].
Schwimmer JB, Lavine JE, Wilson LA, Neuschwander-Tetri BA, Xanthakos SA, Kohli R, Barlow SE, Vos MB, Karpen SJ, Molleston JP, Whitington PF, Rosenthal P, Jain AK, Murray KF, Brunt EM, Kleiner DE, Van Natta ML, Clark JM, Tonascia J, Doo E; NASH CRN. In Children with Nonalcoholic Fatty Liver Disease, Cysteamine Bitartrate Delayed Release Improves Liver Enzymes but does not Reduce Disease Activity Scores.Gastroenterology. 2016 Aug 25. pii: S0016-5085(16)34969-1. PubMed PMID: 27569726; PubMed Central PubMed Central PMCID: PMC5124386 [Available on 2017-12-01].
Seibert TM, White NS, Kim GY, Moiseenko V, McDonald CR, Farid N, Bartsch H, Kuperman J, Karunamuni R, Marshall D, Holland D, Sanghvi P, Simpson DR, Mundt AJ, Dale AM, Hattangadi-Gluth JA. Distortion inherent to magnetic resonance imaging can lead to geometric miss in radiosurgery planning.Pract Radiat Oncol. 2016 Nov - Dec;6(6):e319-e328. PubMed PMID: 27523440; PubMed Central PMCID: 5099096 [Available on 2017-11-01].
Honerkamp-Smith G, Xu R. Three measures of explained variation for correlated survival data under the proportional hazards mixed-effects model.Stat Med. 2016 Oct 15;35(23):4153-65. PubMed PMID: 27241815; PubMed Central PMCID: PMC5012918 [Available on 2017-10-15].
Mausbach BT, Irwin SA.Depression and healthcare service utilization in patients with cancer. Psychooncology. 2016 Apr 21. PubMed PMID: 27102731; PubMed Central PMCID: PMC5074898 [Available on 2017-10-21].
Karunamuni RA, Moore KL, Seibert TM, Li N, White NS, Bartsch H, Carmona R, Marshall D, McDonald CR, Farid N, Krishnan A, Kuperman J, Mell LK, Brewer J, Dale AM, Moiseenko V, Hattangadi-Gluth JA.
Radiation sparing of cerebral cortex in brain tumor patients using quantitative neuroimaging.Radiother Oncol. 2016 Jan 21; pii: S0167-8140(16)00006-2. PMID: 26806266 [PubMed - as supplied by publisher]. PMCID: PMC4764402.
Marshall DC, Jackson ME, Hattangadi-Gluth JA.Disclosure of Industry Payments to Physicians: An Epidemiologic Analysis of Early Data From the Open Payments Program.Mayo Clin Proc. 2016 Jan;91(1):84-96. PMID: 26763512 [PubMed - in process]. PMCID: 4739814.
Edland SD, Ard MC, Sridhar J, Cobia D, Martersteck A, Mesulam MM, Rogalski EJ.Proof of concept demonstration of optimal composite MRI endpoints for clinical trials.
Alzheimers Dement (N Y). 2016 Sep;2(3):177-181. PMID: 28345017 [PubMed]
2015
Marshall DC, Punglia RS, Fox D, Recht A, Hattangadi-Gluth JA.Medical Malpractice Claims in Radiation Oncology: A Population-Based Study 1985-2012. Int J Radiat Oncol Biol Phys. 2015 Oct 1;93(2):241-50. PMID: 26232856. PMCID: PMC4575635.
Gianella S, Anderson CM, Richman DD, Smith DM, Little SJ. No evidence of posttreatment control after early initiation of antiretroviral therapy. AIDS. 2015 Oct 23;29(16):2093-7. PMID: 26544575 [PubMed - in process] PMCID: PMC4638137 [Available on 2016-10-23]
Rojas SM, Smith SD, Rojas S, Vaida F. Longitudinal hyperlipidemia outcomes at three student-run free clinic sites.Fam Med. 2015 Apr;47(4):309-14. PMID: 25853603 [PubMed - in process]
Ai R, Whitaker JW, Boyle DL, Tak PP, Gerlag DM, Wang W, Firestein GS.DNA methylome signature in early rheumatoid arthritis synoviocytes compared with longstanding rheumatoid arthritis synoviocytes.
Arthritis Rheumatol. 2015 Mar 25. doi: 10.1002/art.39123. [Epub ahead of print] PMID: 25808728 [PubMed - as supplied by publisher]. PMCID: PMC4485541 [Available on 2016-07-01]
2014
Light GA, Swerdlow NR.
Neurophysiological biomarkers informing the clinical neuroscience of schizophrenia: mismatch negativity and prepulse inhibition of startle.
Curr Top Behav Neurosci. 2014;21:293-314. PMID: 24850080 PMCID:
PMC5951188
Sonnenberg SB, Rane AA, Liu CJ, Rao N, Agmon G, Suarez S, Wang R, Munoz A, Bajaj V, Zhang S, Braden R, Schup-Magoffin PJ, Kwan OL, DeMaria AN, Cochran JR, Christman KL.Delivery of an engineered HGF fragment in an extracellular matrix-derived hydrogel prevents negative LV remodeling post-myocardial infarction.Biomaterials. 2015 Mar;45:56-63. doi: 10.1016/j.biomaterials.2014.12.021. Epub 2015 Jan 13. PubMed PMID: 25662495 [PubMed - in process] PMCID: PMC4326250 [Available on 2016-03-01]
Salvo J, Lyubasyuk V, Xu M, Wang H, Wang F, Nguyen D, Wang K, Luo H, Wen C, Shi C, Lin D, Zhang K, Chen R. Next-generation sequencing and novel variant determination in a cohort of 92 familial exudative vitreoretinopathy patients.
Invest Ophthalmol Vis Sci. 2015 Feb 24;56(3):1937-46. doi: 10.1167/iovs.14-16065. PMID: 25711638 PMCID: PMC4365990 [Available on 2015-09-01]
Boland BS, Widjaja CE, Banno A, Zhang B, Kim SH, Stoven S, Peterson MR, Jones MC, Su HI, Crowe SE, Bui JD, Ho SB, Okugawa Y, Goel A, Marietta EV, Khosroheidari M, Jepsen K, Aramburu J, López-Rodríguez C, Sandborn WJ, Murray JA, Harismendy O, Chang JT.Immunodeficiency and autoimmune enterocolopathy linked to NFAT5 haploinsufficiency.J Immunol. 2015 Mar 15;194(6):2551-60. doi: 10.4049/jimmunol.1401463. Epub 2015 Feb 9. PubMed PMID: 25667416 [PubMed - in process] PMCID: PMC4355235 [Available on 2016-03-15]
Boland BS, Boyle DL, Sandborn WJ, Firestein GS, Levesque BG, Hillman J, Zhang B, Proudfoot J, Eckmann L, Ernst PB, Rivera-Nieves J, Pola S, Copur-Dahi N, Zou G, Chang JT. Validation of Gene Expression Biomarker Analysis for Biopsy-based Clinical Trials in Crohns Disease.Inflamm Bowel Dis. 2015 Feb;21(2):323-30. doi: 10.1097/MIB.0000000000000264. PMID: 25545378 [PubMed - in process] PMCID: PMC4404151
Martin AS, Distelberg B, Palmer BW, Jeste DV. Development of a new multidimensional individual and interpersonal resilience measure for older adults.
Aging Ment Health. 2015 Jan;19(1):32-45. doi: 10.1080/13607863.2014.909383. Epub 2014 May 1. PMID: 24787701 [PubMed - indexed for MEDLINE] PMCID: PMC4414022 [Available on 2016-01-01]
Leung VY, Aladin DM, Lv F, Tam V, Sun Y, Lau RY, Hung SC, Ngan AH, Tang B, Lim CT, Wu EX, Luk KD, Lu WW, Masuda K, Chan D, Cheung KM. Mesenchymal stem cells reduce intervertebral disc fibrosis and facilitate repair.Stem Cells. 2014 Aug;32(8):2164-77. doi: 10.1002/stem.1717. PMID: 24737495 [PubMed - in process]
Moore RC, Martin AS, Kaup AR, Thompson WK, Peters ME, Jeste DV, Golshan S, Eyler LT. From suffering to caring: a model of differences among older adults in levels of compassion.Int J Geriatr Psychiatry. 2015 Feb;30(2):185-91. doi: 10.1002/ gps.4123. Epub 2014 Apr 15. PMID: 24733732 PMCID: PMC4198513
Madison SJ, Monahan AM, Agarwal RR, Furnish TJ, Mascha EJ, Xu Z, Donohue MC, Morgan AC, Ilfeld BM.A randomized, triple-masked, active-controlled investigation of the relative effects of dose, concentration, and infusion rate for continuous popliteal-sciatic nerve blocks in volunteers.Br J Anaesth. 2015 Jan;114(1):121-9. doi: 10.1093/bja/aeu333. Epub 2014 Sep 23. PubMed PMID: 25248648 [PubMed - indexed for MEDLINE] PMCID: PMC4263082 [Available on 2016-01-01]
Nguyen NH, McCormack SA, Vutien P, Yee BE, Devaki P, Jencks D, Nguyen MH. Meta-Analysis: Superior Treatment Response in Asian Patients with Hepatitis C Virus Genotype 6 versus Genotype 1 with Pegylated Interferon and Ribavirin. Intervirology. 2015 Jan 10;58(1):27-34. [Epub ahead of print] PMID: 25592813 [PubMed - as supplied by publisher] PMCID: PMC4351719 [Available on 2016-01-10]
Ma GL, Murphy JD, Martinez ME, Sicklick JK.Epidemiology of gastrointestinal stromal tumors in the era of histology codes: results of a population-based study.
Cancer Epidemiol Biomarkers Prev. 2015 Jan;24(1):298-302. doi: 10.1158/1055-9965.EPI-14-1002. Epub 2014 Oct 2. PMID: 25277795 [PubMed - in process] PMCID: PMC4294949
Moore RC, Dev SI, Jeste DV, Dziobek I, Eyler LT.Distinct neural correlates of emotional and cognitive empathy in older adults.Psychiatry Res. 2014 Dec 24. pii: S0925-4927(14)00268-6. doi: 10.1016/j.pscychresns.2014.10.016. [Epub ahead of print] PubMed PMID: 25770039 PMCID: PMC4404184 [Available on 2016-04-30]
Hyun S, Forbang NI, Allison MA, Denenberg JO, Criqui MH, Ix JH. Ankle-brachial index, toe-brachial index, and cardiovascular mortality in persons with and without diabetes mellitus. J Vasc Surg. 2014 Aug;60(2):390-5. doi: 10.1016/j. jvs.2014.02.008. Epub 2014 Mar 21. PMID: 24657294 [PubMed - indexed for MEDLINE] PMCID: PMC4112146
Schulten V, Tripple V, Sidney J, Greenbaum J, Frazier A, Alam R, Broide D, Peters B, Sette A.Association between specific timothy grass antigens and changes in TH1- and TH2-cell responses following specific immunotherapy.J Allergy Clin Immunol. 2014 Nov;134(5):1076-83. doi: 10.1016/j.jaci.2014.05.033. Epub 2014 Jul 16. PubMed PMID: 25042980 [PubMed - indexed for MEDLINE] PMCID: PMC4253970 [Available on 2015-11-01]
2013
Donohue MC, Jacqmin-Gadda H, Le Goff M, Thomas RG, Raman R, Gamst AC, Beckett LA, Jack CR Jr, Weiner MW, Dartigues JF, Aisen PS; Alzheimer’s Disease Neuroimaging Initiative. Estimating long-term multivariate progression from short-term data.
Alzheimers Dement. 2014 Oct;10(5 Suppl):S400-10. doi: 10.1016/j. jalz.2013.10.003. Epub 2014 Mar 20. PMID: 24656849 [PubMed - indexed for MEDLINE] PMCID: PMC4169767 [Available on 2015-10-01]
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Ilfeld BM, Malhotra N, Furnish TJ, Donohue MC, Madison SJ.Liposomal bupivacaine as a single-injection peripheral nerve block: a dose-response study.Anesth Analg. 2013 Nov;117(5):1248-56. PubMed PMID: 24108252; PubMed Central PMCID: PMC3808480
Toneff T, Funkelstein L, Mosier C, Abagyan A, Ziegler M, Hook V.Beta-amyloid peptides undergo regulated co-secretion with neuropeptide and catecholamine neurotransmitters.Peptides. 2013 Aug;46:126-35. PubMed PMID: 23747840; PubMed Central PMCID: PMC3842158
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Zhao L, Grob S, Avery R, Kimura A, Pieramici D, Lee J, Rabena M, Ortiz S, Quach J, Cao G, Luo H, Zhang M, Pei M, Song Y, Tornambe P, Goldbaum M, Ferreyra H, Kozak I, Zhang K.Common variant in VEGFA and response to anti-VEGF therapy for neovascular age-related macular degeneration.Curr Mol Med. 2013 Jul;13(6):929-34. PubMed PMID: 23745581; PubMed Central PMCID: PMC3805052
McLean JS, Lombardo MJ, Badger JH, Edlund A, Novotny M, Yee- Greenbaum J, Vyahhi N, Hall AP, Yang Y, Dupont CL, Ziegler MG, Chitsaz H, Allen AE, Yooseph S, Tesler G, Pevzner PA, Friedman RM, Nealson KH, Venter JC, Lasken RS.Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum.Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):E2390-9. PubMed PMID: 23754396; PubMed Central PMCID: PMC3696752
St-Jules DE, Watters CA, Brunt EM, Wilkens LR, Novotny R, Belt P, Lavine JE, for the NASH CRN.
Estimation of Fish And Omega-3 Fatty Acid Intake In Pediatric Nonalcoholic Fatty Liver Disease.J Pediatr Gastroenterol Nutr. 2013 Jun 30;PubMed PMID: 23820405; PubMed Central PMCID: PMC3864540. [Epub ahead of print]
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Stanford SM, Maestre MF, Campbell AM, Bartok B, Kiosses WB, Boyle DL, Arnett HA, Mustelin T, Firestein GS, Bottini N.Protein tyrosine phosphatase expression profile of rheumatoid arthritis fibroblast-like synoviocytes: a novel role of SH2 domain-containing phosphatase 2 as a modulator of invasion and survival.Arthritis Rheum. 2013 May;65(5):1171-80. PubMed PMID: 23335101; PubMed Central PMCID: PMC3636201
Han J, Liu Y, Rao F, Nievergelt CM, OConnor DT, Wang X, Liu L, Bu D, Liang Y, Wang F, Zhang L, Zhang H, Chen Y, Wang H. Common genetic variants of the human uromodulin gene regulate transcription and predict plasma uric acid levels.Kidney Int. 2013 Apr;83(4):733- 40. PubMed PMID: 23344472; PubMed Central PMCID: PMC3687544
Plemmons DK, Kalichman MW.Reported goals of instructors of responsible conduct of research for teaching of skills.J Empir Res Hum Res Ethics. 2013 Apr;8(2):95-103. PubMed PMID: 23651933; PubMed Central PMCID: PMC3705638
Barrett CL, Schwab RB, Jung H, Crain B, Goff DJ, Jamieson CH, Thistlethwaite PA, Harismendy O, Carson DA, Frazer KA.MTranscriptome sequencing of tumor subpopulations reveals a spectrum of therapeutic options for squamous cell lung cancer.PLoS One. 2013;8(3):e58714. PubMed PMID: 23527012; PubMed Central PMCID: PMC3604164
Jeste DV, Savla GN, Thompson WK, Vahia IV, Glorioso DK, Martin AS, Palmer BW, Rock D, Golshan S, Kraemer HC, Depp CA.Association between older age and more successful aging: critical role of resilience and depression.Am J Psychiatry. 2013 Feb 1;170(2):188-96. PubMed PMID: 23223917; PubMed Central PMCID: PMC3593664
Nakano K, Boyle DL, Firestein GS.Regulation of DNA methylation in rheumatoid arthritis synoviocytes. J Immunol. 2013 Feb 1;190(3):1297-303. PubMed PMID: 23277489; PubMed Central PMCID: PMC3552038
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Jin H, Shih PA, Golshan S, Mudaliar S, Henry R, Glorioso DK, Arndt S, Kraemer HC, Jeste DV.Comparison of longer-term safety and effectiveness of 4 atypical antipsychotics in patients over age 40: a trial using equipoise-stratified randomization.J Clin Psychiatry. 2013 Jan;74(1):10-8. PubMed PMID: 23218100; PubMed Central PMCID: PMC3600635
2012
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Preliminary study of a web-based tool for enhancing the informed consent process in schizophrenia research.Schizophr Res. 2012 Nov;141(2-3):247-50. PubMed PMID: 22939457; PubMed Central PMCID: PMC3471544
Jiang X, Menon A, Wang S, Kim J, Ohno-Machado L.
Doubly Optimized Calibrated Support Vector Machine (DOC-SVM): An Algorithm for Joint Optimization of Discrimination and Calibration.PLoS One. 2012;7(11):e48823. PubMed PMID: 23139819; PubMed Central PMCID: PMC3490990
Zhang K, Rao F, Miramontes-Gonzalez JP, Hightower CM, Vaught B, Chen Y, Greenwood TA, Schork AJ, Wang L, Mahata M, Stridsberg M, Khandrika S, Biswas N, Fung MM, Waalen J, Middelberg RP, Heath AC, Montgomery GW, Martin NG, Whitfield JB, Baker DG, Schork NJ, Nievergelt CM, OConnor DT.Neuropeptide Y (NPY): genetic variation in the human promoter alters glucocorticoid signaling, yielding increased NPY secretion and stress responses.J Am Coll Cardiol. 2012 Oct 23;60(17):1678-89. PubMed PMID: 23021333; PubMed Central PMCID: PMC3687554
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Grid Binary Logistic REgression (GLORE): building shared models without sharing data. J Am Med Inform Assoc. 2012 Sep-Oct;19(5):758-64. PubMed PMID: 22511014; PubMed Central PMCID: PMC3422844
Dunn W, Sanyal AJ, Brunt EM, Unalp-Arida A, Donohue M, McCullough AJ, Schwimmer JB. Modest alcohol consumption is associated with decreased prevalence of steatohepatitis in patients with non-alcoholic fatty liver disease (NAFLD). J Hepatol. 2012 Aug;57(2):384-91. PubMed PMID: 22521357; PubMed Central PMCID: PMC3399018
Grob S, Luo J, Hughes G, Lee C, Zhou X, Lee J, Du H, Ferreyra H, Freeman WR, Kozak I, Zhang K.Genetic analysis of simultaneous geographic atrophy and choroidal neovascularization.Eye (Lond). 2012 Aug;26(8):1106-13. PubMed PMID: 22699975; PubMed Central PMCID: PMC3420042
Yost SE, Smith EN, Schwab RB, Bao L, Jung H, Wang X, Voest E, Pierce JP, Messer K, Parker BA, Harismendy O, Frazer KA.
Identification of high-confidence somatic mutations in whole genome sequence of formalin-fixed breast cancer specimens.Nucleic Acids Res. 2012 Aug;40(14):e107. PubMed PMID: 22492626; PubMed Central PMCID: PMC3413110
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Subjective social status predicts in vivo responsiveness of β-adrenergic receptors.Health Psychol. 2012 Jul;31(4):525-9. PubMed PMID: 22023437; PubMed Central PMCID: PMC3386425
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Fatigue and sleep quality are associated with changes in inflammatory markers in breast cancer patients undergoing chemotherapy.Brain Behav Immun. 2012 Jul;26(5):706-13. PubMed PMID: 22406004; PubMed Central PMCID: PMC3372667
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Jiang X, Boxwala AA, El-Kareh R, Kim J, Ohno-Machado L.
A patient driven adaptive prediction technique to improve personalized risk estimation for clinical decision support. J Am Med Inform Assoc. 2012 Jun;19(1e):e137-44. PubMed PMID: 22493049; PubMed Central PMCID: PMC3392846
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Ezetimibe and simvastatin reduce cholesterol levels in zebrafish larvae fed a high-cholesterol diet.Cholesterol. 2012;2012:564705. PubMed PMID: 22693663; PubMed Central PMCID: PMC3369394
Aupperle RL, Tankersley D, Ravindran LN, Flagan T, Stein NR, Stein MB, Paulus MP.
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Sadja J, Tomfohr L, Jiménez JA, Edwards KM, Rock CL, Calfas K, Mills PJ.Higher physical fatigue predicts adherence to a 12-week exercise intervention in women with elevated blood pressure.Health Psychol. 2012 Mar;31(2):156-63. PubMed PMID: 21988095; PubMed Central PMCID: PMC3295923
Ziegler MG, Milic M.
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Carney CE, Buysse DJ, Ancoli-Israel S, Edinger JD, Krystal AD, Lichstein KL, Morin CM.
The consensus sleep diary: standardizing prospective sleep self-monitoring.Sleep. 2012 Feb 1;35(2):287-302. PubMed PMID: 22294820; PubMed Central PMCID: PMC3250369
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Pardee PE, Dunn W, Schwimmer JB. Non-alcoholic fatty liver disease is associated with low bone mineral density in obese children.Aliment Pharmacol Ther. 2012 Jan;35(2):248-54. PMID: 22111971 [PubMed - indexed for MEDLINE] PMCID: PMC4624396
Shoucri BM, Edwards KM, Schmid-Schönbein GW, Mills PJ.Plasma-stimulated pseudopod formation is increased in patients with elevated blood pressure.Hypertens Res. 2011 Jun;34(6):787-9. PubMed PMID:21412244; PubMed Central PMCID: PMC3287064